Nova Biologica Reperta

Study of interaction between nicotinamide and human serum albumin using spectroscopic techniques and molecular docking simulation simulation

Somaieh Soltani

Human serum albumin is one of the most important blood proteins that has the ability to bind a wide range of compounds and different drugs. Hence, knowing how drugs bind to albumin is crucial to understand their pharmacokinetics and pharmacodynamic properties. The binding of drugs to protein affects the drug's excretion, distribution and interaction in the target tissues. Nicotinamide (NA) is a safe and inexpensive medical supplement that used to prevent and treat vitamin B3 deficiency. In this research, the molecular mechanism of the interaction between nicotinamide and human serum albumin was studied by the utilization of spectroscopic and molecular docking methods. The effects of temperature, acidic/basic pHs, metal ions, urea, and glucose on the interaction between nicotinamide and human serum albumin were also investigated. The spectroscopic studies indicated that the interaction between nicotinamide and human serum albumin is mainly controled by hydrophobic forces and the interaction is spontaneous. The number of binding site and binding constant is 1 and 4.6×10⁴ (L/mol), respectively, which were increased in the presence of glucose. The presence of metallic ions and basic pH decreased the binding constant of nicotinamide to albumin. The obtained results indicated that nicotinamide tend to binds to the similar sites wherever the molecules with acidic moieties bind. The results could be helpful to interpret the mechanisms of actions of nicotinamide in the various physiological phenomena in the human body.

Evaluating the effects of metformin on irisin and serum biochemical parameters in male sprague-dawley rats fed by a high-fat emulsion diet

Parichehreh Yaghmaei

Irisin is a myokine secreted mostly by muscles after exercise, and its secretion level changes in metabolic disorders. The aim of present study was to investigate the effect of metformin on changes in the levels of plasma irisin, blood glucose and insulin resistance in male Sprague-Dawley rats receiving a high-fat emulsion diet. Twenty-four rats were divided into a normal control group (n = 8) and a high-fat diet group (n = 16). Then, high-fat diet group was divided into two subgroups, including high-fat diet control group (n = 8) and metformin group (n = 8). The normal control group received a standard diet. The high-fat diet control group received a high-fat emulsion diet containing corn oil by gavage on a daily basis for six weeks, and the metformin group received a high-fat emulsion diet with metformin (250 mg/kg/daily). At the end of the six-week period, factors such as glucose, insulin, irisin, Adiponectin, insulin resistance, liver enzymes, tumor necrosis factor α (TNF-α), serum lipid profile, lipid profile and lipid peroxidation in liver were measured and PGC-1α gene expression were examined in adipose tissue by Real-time PCR method. Liver histological tests with hematoxylin-eosin staining were performed to evaluate fat accumulation in liver tissue. Blood glucose level, insulin resistance, adiponectin, serum irisin level and liver lipid profile in the group receiving high-fat diet compared to the normal control group increased significantly (P <0. 05). Treatment with metformin caused a significant decrease in the level of these parameters compared to the high-fat diet group (P <0. 05) and an increase in the expression of PGC-1α gene in adipose tissue was observed in this group. As insulin resistance increased in rats receiving the high-fat diet, serum irisin level also increased, and with improving blood glucose and insulin resistance by metformin, serum irisin level was decreased. These results suggested that the elevated irisin levels may be a compensatory response to insulin resistance and impaired glucose metabolism. Hence, irisin could be considered as a potential target for the treatment of type 2 diabetes.

Green extracellular synthesis of the Fe2O3 nanoparticles by a native marine bacterium, Alcaligenes sp. strain NV06

Morahem Ashengroph

This study investigated the potential of aquatic bacteria for their ability as a biocatalyst to synthesized Fe2O3 nanoparticles using iron precursor, FeCl3. A total of 25 aquatic bacterial strains were isolated in trypticase soy agar plus 10 mM FeCl3 with selective enrichment technique. Among the bacterial strains evaluated, NV06 was the only strain able to synthesize Fe2O3 nanoparticles extracellularly. The strain NV06 was identified as Alcaligenes sp., on the basis of phenotypic and molecular characteristics. Extracellular synthesis of Fe2O3 nanoparticles by this strain was investigated under the optimal conditions. The biosynthesized Fe2O3 nanoparticles were characterized using UV–visible spectrophotometry (UV-Vis), Scanning electron microscopy (SEM), Energy-dispersive X-ray spectroscopy (EDX), and Fourier transform infrared (FTIR) spectroscopy. The results showed that cell-free extract (CFE) of the bacterium strain can produce the rod-shaped Fe2O3 nanoparticles with mean edge lengths of 80.2 nm and mean diameters of 25.5 nm, after being exposed to FeCl3 solution (10 mM), at an optimum pH of 6 and an optimum temperature of 28 °C, after 96 hours of incubation at 150 rpm. This is the first report on the extracellular biosynthesis of Fe2O3 nanoparticles using the genus of Alcaligenes under the CFE strategy. It could be speculated that the results of the study can hopefully introduce the inherent capabilities of aquatic microbes as safe, simple, and effective biocatalysts in the production of Fe2O3 nanoparticles.

Enzymatic diversity in the haloactinomycetes isolated from rhizosphere of the plants in saline soils at the periphery of Dasht-e-Kavir desert

Ensieh Salehghamari

Saline rhizospheric areas are untouched environments for isolating actinomycetes with the potential of valuable salt tolerant enzyme production. In this study, we isolated and evaluated a total number of of 26 actinomycete strains from plant rhizosphere of the periphery of Dasht-e-Kavir desert. Isolated actinomycetes produced different enzymes. Among them 50, 46, 39, 27, 10 and 7 % of the isolates produced amylase, lipase, protease, gelatinase, lecithinase and urease, respectively. The most frequently produced enzymes among the isolates were amylase, lipase and protease. Combined hydrolytic activity was also detected in some actinomycete strains. Among the isolates, strains Q1, Q4 and Q11 with the most diverse enzymes production, were identified and their 16s rRNA analysis showed that they are mostly similar to the Streptomyces scopiformis, Streptomyces argenteolus and Streptomyces manipurensis, respectively. Finally, due to the enzymatic diversity obtained and the valubility of the halophilic bacterial enzymes in industry, it seems that actinomycetes isolated from this saline habitat are potentially suitable for biotechnological applications.

The impact of drought stress on antioxidant activities of basil (Ocimum basilicum) cultivars extracts

Fatemeh Khakdan

Basil is an important medicinal plant, belonging to the Lamiaceae family. Basil is used for the treatment of different diseases such as stomachache, headache, constipation, fever and infections, as well as to reduce and regulate the blood sugar. Moreover, Basil is known for its antibacterial, antifungal and antioxidant properties. In this study, the impact of drought stress on phenols and flavonoids concentrations, as well as the antioxidant activities of leaf extract of three basil cultivars were investigated. Seeds of basil cultivars (mikhak, green, purple) were cultivated in sand-loamy soil and drought stresses (75%, 50% and 25% of the field capacity) were applied on six-leave plants. Experiments were conducted in a completely randomized design and three repeats. Total phenols, total flavonoids and flavonols concentrations of basil leaf extracts and their antioxidant activities were measured. The maximum values (with significant differences) of three groups of non-enzymatic antioxidants and the highest levels of antioxidant activities were observed for green cultivars under mild stresses (75% of the field capacity). It was observed that antioxidant activities were elevated by the increase of the concentration of the plant extract. Drought stress results in oxidative stress in basil plants. Phenols, flavonoids and flavonols are well-known as strong antioxidants have a role in the plant’s protection against the oxidative stress. In thrice cultivars of basil which were investigated, concentrations and abilities of these compounds to inhibit free radicals were decreased by the increase of the levels of drought stresses. It seems that both basil genotypes and drought stress levels affected the production of antioxidants studied and, consequently, have impacts on the plant inhibitory abilities against the oxidative stress.

The effect of rhizospheric bacteria on the physiological and biochemical characteristics of safflower (Carthamus tinctorius)

Maryam Mohammadi-Sichani

Rhizospheric bacteria are among the beneficial soil microorganisms that improve plant growth. These bacteria increase plant growth through various mechanisms such as the production of various phytohormones and the ability to solubilize phosphate. The aim of this study was to investigate the effects of rhizosphere bacteria on the growth of Carthamus tinctorius to improve its physiological and biochemical indicators. Carthamus tinctorius seeds were inoculated with five isolates of rhizosphere bacteria and were then planted the seeds in pots. Subsequently, the physiological and biochemical parameters of the plants, including the rates of auxin production, phosphate dissolving, photosynthetic pigments and the contents of proline and malondialdehyde were measured. For this purpose, a factorial experiment were conducted using a completely randomized design with three replications. The ANOVA was performed and a comparison of the means was carried out using Duncan’s multiple range test. The results indicated that the largest stem fresh weight, root fresh and dry weights observed in the treatments of using Pseudomonas fluorescens (auxin concentration of 23.55 μg/mL) and Bacillus muralis (auxin concentration of 22.27 μg/mL). In addition, all bacterial species increased the safflower seed germination rate compared to the control group. The largest malondialdehyde content was recorded in the treatment with Bacillus albus, and MDA content decreased in the treatments that produced larger amounts of auxin. In general, the finding of this research suggested that bacterial inoculation was capable to significantly affect the growth of safflower and improve its qualitative and quantitative growth parameters.

Study of morphological, anatomical characteristics and metabolic assay of some Ulva species (sea lettuce) in the coastal waters of the Persian Gulf, Iran

Masoud Sheidai

The genus Ulva L. (Sea lettuce), one of the most valuable marine macroalgae, is found in shallow coastal areas and in brackish and fresh water around the world. Ulva species have nutritional and medicinal values in addition to other applications, and contain various compounds such as lipids, proteins and carotenoids. These species have high phenotypic plasticity and varied in response to different environmental conditions. In this study, 38 populations of 10 species of Ulva from the coastal areas of the Persian Gulf and Oman Sea, from different areas of Bushehr, Hormozgan and Sistan and Baluchestan provinces, were studied and identified on the basis of morphological and anatomical traits. Different populations showed variations in characteristics such as height, shape and color of thallus, number of pyrenoids and cell dimensions. Metabolites such as total protein, total oil, chlorophyll a, b and carotenoids contents were measured and compared among the different populations. The results should that the percentage of protein was highest in U. prolifera of Shif Island from Bushehr province as compared with the Ulva species studied, with about 26.5% of dry weight, and the percentage of total oil was lowest in U. flexuosa of Hakhamanesh region from Hormozgan province as compared with the species studied, with about 4.8% of dry weight. These results show that different environmental conditions affect the morphological and anatomical structure of species and the content of their metabolites. Due to the high-protein and low-calorie content of the Ulva genus and the importance of finding new and sustainable resources for food and pharmaceutical industries, the species of this genus have valuable potentials.

Micromorphological study on the seeds of wild species of Pyrus (Rosaceae) in Iran and their taxonomic implication

Asghar Zamani

The seed micromorphological characters of 15 taxa of Iranian Pyrus comprising 22 individuals were examined by Scanning Electron Microscopy (SEM) and Digital Microscopy (DM) for the first time in this survey. For the assessment of probable ecological effects, several individuals of some widespread species were studied. After collecting several samples of each wild taxa of Pyrus from different localities in a ten-year period, the specimens were identified by means of the examination of type specimens and different Floras. After the examination of the seeds surface, qualitative (e.g., shape and ornamentation of seeds including areolate, foveate, reticulate, colliculate, striate and undulate types) and quantitative characters (e.g., size of seeds, size of surface cells and thickness of cell walls) were assessed. Statistical analyses were performed on the data using SPSS software. According to these observations, seed morphological characters showed to have a considerable variation even among the different individuals of the same species, verifying complexity of the genus as revealed by the different approaches which were previously reported. However, some descriptive characters of seeds such as shape, size, surface ornamentation type, cell size and cell wall thickness are presented for the first time for the genus.