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Showing 391 results for Type of Study: Original Article

Delaram Eslimi Esfahani, Shahrbanoo Oryan, Mohammad Inabiun, Manijeh Karimian Peiro,
Volume 4, Issue 2 (9-2017)
Abstract

In cholestasis syndrome, the change of bile acids, salts, endotoxins and opioidsis is accompanied with hepaticencephalopathy and brain trauma; therefore, in this study, the histopathological changes of hippocampus after bile duct ligation were investigated. This study was performed on male Wistar rats. The rats were divided into three groups, namely the control, sham and cholestatic groups. After two weeks, the rats were killed under anesth-esia and their brains were dissected with no delay. The specimens were processed routinely and were sectioned into slices of 6-micron thickness. The sections were stained by Hematoxiline-Eosin (H&E) method. Subsequently, they were studied using optical microscope. Necrotic cells, the diminution of cell density and wrinkled chromatic nuclei were observed in hippocampus section. In addition, the thickness of hippocampus was mostly decreased. However, in the sham and control groups no changes were observed. Since endotoxin causes tissue trauma, the increase of en-dotoxin may result in tissue changes in the brain.
Seyedeh Sadaneh Tabatabaei Nia, Mona Farhadi, Kazem Parivar,
Volume 4, Issue 2 (9-2017)
Abstract

Nowadays, with the applications of titanium dioxide nanoparticles (TiO2-NPs) in pharmacy, food industry, cosmetics, toothpaste and sunscreens, pregnant women are exposed to nanoparticles. Since tooth development is vuln-erable to environmental impacts and mandibular first molar bud develops before maxillary first molar bud, in this ex-perimental study the effects of TiO2-NPs on the development of first mandibular molar bud in NMRI mouse was inve-stigated. Twenty five female NMRI mice were randomly divided into five groups (N=5); Control group (pregnant mice without any treatment), sham group (treated with distilled water), experimental groups 1, 2 and 3 (treated with 50, 150 and 500 mg/kg BW TiO2-NPs, respectively, via gavage from embryonic days 10.5-14.5). On E14.5, embryos heads were prepared for histological examination and dental tissues were evaluated. Data were analyzed by ANOVA and post hoc test (Tukey). Microscopic observation showed tissue disorganization in experimental groups. Findings showed that in experimental groups 1 and 2, the diameter of bud and dental papilla and the length of dental bud decreased sign-ificantly. In experimental group 2, decrease in the diameter of dental follicle, dental bud and dental papilla and the le-ngth of dental bud was significant. On the other hand, in experimental group 3, only the decrease in the length of dental bud was significant. These findings showed that nano titanium dioxide can reduce the size of dental buds and is capable of preventing tooth development.
Maryam Abdoli Nasab, Mehdi Rahimi,
Volume 4, Issue 3 (12-2017)
Abstract

Thirty eight ecotypes of watermelon were collected from different parts of Iran. After the preparation of the field, these eotypes were cultivated in a completely randomized block design with three replications. In order to invest-igate genetic diversity, genomic DNA samples were extracted from leaves and Polymerase chain reactions were optimized using 14 SRAP primer pairs. One hundred thirty six polymorphic bands were detected, of which the EM10-Me4 was the most abundant primer pair with 19 bands and EM16-Me4 and EM16-Me14 were the least primer pairs with 7 bands. PIC index varied from 0.20 to 0.32 and genetic diversity was 0.17 to 0.28 on the basis of Nei index. Fisher's Linear Detection Analysis showed that the UPGMA method and the grouping accuracy of about 90% are more appropriate than other cluster analysis methods. Cluster analysis, using Jakard method, was performed and the ecotypes studied were classified into five distinct groups. Based on the PCA, the first and second components included 92.5% of the variation, which represents the proper distribution of the markers on the whole genome.
Raheleh Ahmadpour, Saeed Reza Hosseinzadeh, Nezam Armand, Somayeh Chashiani,
Volume 4, Issue 3 (12-2017)
Abstract

Water stress is one of the most important factors limiting the growth and yield of plants in many parts of the world. In order to evaluate the effects of water stress on some morphological, physiological and antioxidant enzyme activity traits of lentil, four lentil cultivars (i.e. Gachsaran, Kimia, Ziba and Robat) in four water deficit treatments including 25%, 50%, 75% and 100% of the field capacity (control) were studied in a factorial experiment, based on a completely randomized design with three replications. Water stress at 25 and 50% field capacity significantly decreased morpho-physiological traits and significantly increased antioxidant enzyme activity, proline and protein contents of all genotypes in comparison with the control group. Gachsaran and Robat cultivars were superior in most traits in comparison with the Kimia and Ziba cultivars. Under severe stress, the amounts of  proline and protein contents, CAT and SOD enzyme activity were significantly higher in Robat and Gachsaran cultivars than those of the Kimiya and Ziba cultivars. Results showed that Robat and Gachsaran cultivars were probably affected less by water stress due to more stress tolerance using various mechanisms such as more antioxidant enzyme activity, increased proline, proteins and photosynthetic pigments contents. Studied traits were introduced as suitable markers for identification of drought tolerant genotypes. Accordingly, Robat and Gachsaran cultivars were introduced as tolerant cultivars for cultivation under rainfed conditions.
Havva Sharifdini, Kazem Parivar, Nasim Hayati Rodbari,
Volume 4, Issue 3 (12-2017)
Abstract

Of different types of bio-compatible nano‌particles, iron oxide nanoparticle has attracted attention for its applications especially in medicine and magnetic resonance imaging (MRI). We decided to study histological changes in testis and spermatogenesis in mature male mice that are affected by ironoxide nanoparticles (Fe2O3) during fetal period. In this study, the mice were divided into three experimental and two control and sham groups. Iron oxide at do-ses of 10, 30, 50 mg/kg were injected into pregnant mice during 10th, 12th and 14th days of the critical period of fetus testis development. After the maturation of the mice which were born, slices with the thickness of 0.06 µm were prep-ared from adult male testis and epididymis, stained with hematoxylin and eosin. The cells were counted, then the obta-ined data was analyzed with one-way ANONA and Tukey testes. The results showed that the number of epididymis sp-erms at the doses of 10 and 30 mg/kg, testis weight at the dose of 30 mg/kg, primary spermatocytes at the dose 10mg/kg had increased, while the testis diameter in all the three experimental groups and the volume of the testis at the dose of 50 mg/kg had decreased. Disorganization and vacuolization were observed at high doses. Passing through the cell me-mbrane, and considering its oxidation and reduction potentials, it was observed that Iron oxide nanoparticle acts as anti-oxidant at low doses and shows toxicity at high doses. The fact obtained in the paper reflects the dual potential of the ir-on oxide nanoparticle.
Namdar Yousefvand , Delaram Eslimi Esfahani, Tayebeh Bahrami,
Volume 4, Issue 3 (12-2017)
Abstract

Several therapeutic effects have been reported for Peganum harmala and Piper longum. These plants contain flavonoids that probably can affect reproductive endocrine system and reduce fertility. In this study, the impacts of hydroalcoholic extracts of Peganum harmala and Piper longum on pituitary-gonadal axis were investigated. Male mice were divided into one control group and three experimental groups. The first experimental group received the extract of Peganum harmala (200 mg/lit), while the second experimental group received the extract of Piper longum (200 mg/lit) and the third experimental group received the combination of both extracts (200 mg/lit) for 30 days. After the treatment, spermatogonia, spermatocytes and spermatids were counted and serum levels of testosterone, follicle-stimulating hormone (FSH), and luteinizing hormone (LH) were measured. Data were analyzed by SPSS software. Levels of testosterone, FSH and LH showed a significant decrease in the first and third experimental groups in comparison with the control group. Moreover, the number of spermatogonia, spermatocyte and spermatid decreased in these groups. The results of the present study demonstrated that hydroalcoholic extract of Peganum harmala and Piper longum can decrease the pituitary gonadal axis function and spermatogenesis in male NMRI mice.
 
Mohammad Sadegh Khakshoor, Jamileh Pazooki,
Volume 4, Issue 3 (12-2017)
Abstract

Three types of chitin as α (exoskeleton of crustaceans), β (cuttlebone of cephalopods) and γ (some fungal cell wall) exist in nature. Chitosan is the most important derivative of chitin, which has various biological activities. In this study, α, β and γ-chitosans were extracted from Portunus segnis exoskeleton, Sepia pharonis cuttlebone and Aspergillus niger cell wall, respectively. Samples of crab and sepia from Bandar Abbas coastal waters were gathered in the summer of 2014 and samples of Aspergillus niger (PTCC 5223) were obtained from the Iranian Research Organization for Science and Technology (IROST). The amount of chitosan extracted from the Crab was significantly higher than other samples. Antimicrobial properties of these three types of chitosan were explored against 9 bacterial and 2 fungal strains using disc diffusion method. On average α chitosan and γ chitosan revealed to have highest and lowest antimicrobial activities, respectively. Antibacterial properties of chitosan extracts were more than their antifungal properties. Gram negative bacteria as well as gram positive bacteria were sensitive to three types of chitosan. According to observed results, all three types of chitosans have good antimicrobial activities, and further investigations are suggested.
Mahdieh Jafariparizi, Saeed Afsharzadeh, Hamid Reza Akkafi, Shabnam Abbasi,
Volume 4, Issue 3 (12-2017)
Abstract

To investigate the Artemisia vegetation in Isfahan Province, two rangelands of Khorous Galu in the southwest and Ashan in the west of Isfahan were selected. These rangelands are mountainous with semiarid climate. In Khorous galu, 68 species belonging to 50 genera and 24 families were identified. Life forms included hemicryptophytes (39%), therophytes (27.5%), chamaephytes (19%), geophytes (13%) and phanerophytes (2%). Chrotypes existent in Khorous Galu were composed of 56 Irano-Turanian species, 3 Euro-Siberian-Irano-Turanian species, 4 Euro-Siberian-Irano-Turanian-Mediterranean species, 2 Irano-Turanian-Mediterranean species, 1 Irano-Turanian-Saharo-Sindian species and 1 cosmopolitan species. In Ashan area, 88 species belonging to 67 genera and 29 families were identified. Hemicryptophytes (39%), therophytes (28%), geophytes (17%), chamaephytes (15%) and phanerophytes (1%) were the life form composition of the region flora. 73 Irano-Turanian species, 7 Euro-Siberian-Irano-Turanian species, 4 Irano-Turanian-Mediterranean species, 1 Irano-Turanian-Mediterranean-Euro-Siberian species and 1 cosmopolitan species were identified. 2 species were recorded from Isfahan Province for the first time. With regard to the similarity of flora in both regions, that is due to effective similar environmental factors, a uniform management plan for A. aucheri rangelands in Isfahan Province could be selected.
Rezvan Heydaritabar , Hamid Moghimi,
Volume 4, Issue 3 (12-2017)
Abstract

In this study, fungal strains with crude oil biodegradation activity were screened from Shazand oil refinery (Arak). Twelve fungal strains were isolated in PDA medium. TPH assay in the presence of 1% of crude oil showed that the ADH-02 was the most capable strain of oil degradation with an efficiency of 75%. FTIR analysis was revealed that 91% of aliphatic hydrocarbons were degraded by ADH-02. This strain proved to belong to Gliomastix genius with a similarity of 99%. Polycyclic aromatic hydrocarbons degradation analysis with HPLC demonstrated that this strain is capable of removing 67% of anthracene in 14 days. The results showed that Gliomastix sp. was a potent fungal strain in bioremediation of crude oil and polycyclic aromatic hydrocarbon.
Hamid Gholizadeh, Shahryar Saeidi Mehrvarz, Alireza Naqinezhad,
Volume 4, Issue 3 (12-2017)
Abstract

Hyrcanian forests in northern Iran have important tree and shrub elements of Euro-Siberian and rare forest communities, among them beech community widely covers the mountainous forests from Western to Eastern (Gorgan) Hyrcanian region. In order to identify the floristic characteristics and affecting factors on the species richness in pure beech stands in Eastern Guilan, using systematic-random method 54 plots were recorded. A total of 111 plant species belonging to 84 genera and 44 families were identified, with Orchidaceae having 9 species and genus Carex with 6 species being the largest family and genus, respectively. The highest frequency inter-species is Galium odoratum, an understory herb species forming communities in different areas of beech forests in Hyrcanian region. Since the studied region is forest and mountainous, hemicryptophytes and geophytes are the most life forms, respectively in these areas and Euro-Siberian elements (with 30.6 %) form the highest frequency from a chorological point of view. Also, the size of the microrelief and percentage of tree cover create different ecological conditions in plots such as moisture retention and change in the amount of incoming light into the plots, which are the most influential factors on species richness of these areas.
Mehdi Rahimi, Mehdi Ramezani,
Volume 4, Issue 3 (12-2017)
Abstract

Thyme plants are considered to be one of the most widely consumed herbs well-known for their essential oils and secondary metabolites. In order to evaluate the effects of temperature on antioxidant activity, total phenolics, agronomic traits and essential oil of two thyme species (i.e. Thymus vulgaris and Thymus caramanicus), a greenhouse experiment was conducted in 2015 with split plot in a completely randomized design with three replications. The results of this experiment showed significant differences between the two species and different temperatures in terms of the tr-aits measured. The essential oil percentage, antioxidant activity, total phenolics and plant height of Thymus carama-nicus proved to be more than those in Thymus vulgaris. The comparison of mean interaction effect for essential oil pe-rcentage showed that the value of this trait in Thymus caramanicus specimens treated with a temperature of 30°C was more than other treatments. The IC50 rates of Thymus vulgaris and Thymus caramanicus ranged from 24.37 to 54.43 µg/ml in different conditions and total phenolics ranged from 36.63 to 89.37 mg GAEg-1. In addition, the highest anti-oxidant activity, essential oil percentage and phenolic compounds were observed at a temperature of 30°C for both species.
Seyed Amir Teymouri, Amir Parviz Salati, Abdolali Movahedinia, Hossein Pasha Zanoosi, Soleiman Hasanpour,
Volume 4, Issue 3 (12-2017)
Abstract

Fish oil in the diet of fish is constantly at the risk of oxidation. In this study, the effects of feeding sturgeon hybrid (Huso huso ♂ ×Acipenser ruthenus ♀) with different levels of oxidized fish oil (OFO) on thyroid hormones were investigated. Three experimental diets were made by replacing 0 (control), 50 and 100% OFO were made. Ninety hybrid sturgeon, with the initial weights of 212.6 ± 07g were distributed in 9 fiberglass tanks (2 m3) randomly after 2 weeks of adaptation with experimental conditions. Feeding was performed three times daily (08:00, 14:00 and 20:00) for 6 weeks for satisfaction. At the end of the period, blood samples were taken and their serum was separated. Serum thyroxine and triiodotyronine were measured by radioimmunoassay in blood samples. Serum thyroxine, triiodotyronine and thyroxine/triiodotyronine level showed no significant change related to dietary OFO. Our findings showed that dietary-oxidized oil had no effect on blood thyroid hormones levels.
Saide Afrisham, Arastoo Badoei-Delfard, Abdolhamid Namaki Shoushtari, Zahra Karami, Saeid Malek-Abadi,
Volume 4, Issue 4 (12-2017)
Abstract

Alpha-amylases are the most important amylases used in industry. Among them, thermophilic alpha-amylases are of particular importance, which is due to their activity and stability in high temperatures. These enzymes produced by thermophile micro-organisms including bacteria. These thermophilic alpha-amylases are used in various industries such as processing of starch as well as production of detergents and biofuels. In this research, the bacteria which produce the thermophilic alpha-amylases were isolated and characterized in hot springs of Gorooh village in Kerman province. According to the results of screening on the specific liquid and solid media, AT59 was selected as the best strain. Morphological and biochemical characterization of the isolated strain indicated that it belonged to Bacillus sp. and was gram-positive, catalase positive, casein hydrolyzing and acid producing from lactose and sucrose. The results obtained from the optimization of the enzyme production medium showed that among the carbon, nitrogen and ion sources investigated, starch (1 gr/l), gelatin (2 g/l) and magnesium sulfate (1 g/l) had the most increasing effect on the production of AT59 alpha-amylase. Moreover, the highest enzyme production was obtained at pH 5. This enzyme also demonstrated the highest degree of activity and stability in 80 and 70 ℃, respectively. These findings suggested that this enzyme has a considerable potential for use in starch industry.
 

 
 
Saeed Ziaei-Nejad , Donald Lovett, Ali Abroumand,
Volume 4, Issue 4 (12-2017)
Abstract

Gastrointestinal ontogenetic studies constitute one of the basic and important investigations related to the nutrition of aquatic animals. In this investigation, specimens of the western white shrimp (Litopenaeus vannamei) at different developmental stages (from nauplius 1 to postlarvae 120) were assayed for the activities of digestive enzymes. According to the results, at all developmental stages, trypsin, amylase, and lipase enzymes were found to be active. In addition, the peak activities of all enzymes were revealed to occur during the late zoea larval stages (Z3). On the other hand, minimum activities were observed to occur at metamorphosis. During the postlarval developmental stages, amylase and lipase activities increased steadily, whereas the trypsin activity was more or less constant up to the eighteenth week. In conclusion, ontogenetic change in digestive enzyme activity may reflect either a developmentally cued change in enzyme synthesis or a secondary effect of change in the function and relative size of the midgut during its differentiation.
 
 
 
 
Somayeh Ghasemi,
Volume 4, Issue 4 (12-2017)
Abstract

This study aimed to recycle sawdust and blood powder using Eisenia foetida earthworm and investigate some biochemical changes of these waste materials during vermicomposting. Blood powder was mixed with sawdust in proportions of 0, 5 and 10% and the mixture was allowed to pass through earthworm guts for four months. At intervals of 1, 2, 3, 4, 6, 8, 12 and 16 weeks, the biological activity (i.e. basal respiration), pH, EC, total organic carbon, total nitrogen and C:N ratio were determined. The results showed that the period of time, the concentration of blood powder and the interaction between these two significantly affected all parameters. As the incubation time increases, the cumulative amount of mineralized carbon, the total nitrogen and EC increase in all vermicompost treatments whereas organic carbon, C:N ratio and  pH decreased. Adding blood powder to sawdust bed resulted in an increase in carbon mineralization rate, EC and total nitrogen while pH, organic carbon and C: N ratio decreased. At the end of incubation time, the treatment of sawdust with 10 % blood powder resulted in the highest amount of released CO2 (142.1 µg C g-1), EC (3.7 dS m-1) and total nitrogen (2.24 %) and the lowest amount of pH (6.6), organic carbon (22.5 %) and C: N ratio (12.4). According to the results, the process of vermicomposting can be used as a safe method for the disposal of sawdust and blood powder
Farib Noedoost, Somaye Dehdari, Damon Razmjoei, Rahele Ahmadpour, Parvaneh Shoukat,
Volume 4, Issue 4 (12-2017)
Abstract

Ferula stenocarpa from Apiaceae family is a perennial plant with about 2 meters height, which grows in the high temperature of sudanian regions. This research was aimed to investigate the autecology of an endemic plant to Iran, Ferula stenocarpa, in Khuzestan province. Initially, the habitat map was prepared and characteristics of the species habitat including topography, climate, soil properties, companion species, palynology, anatomical studies were determined. In addition, the phenology stage and root system was investigated. The results show that this species is distributed in the altitudes ranging from 159 to 850 m.a.s.l., with the mean annual precipitation of 112.4 to 482.9 millimeters and mean annual temperature of 24.47 to 25.93 ºC. This plant species is found in habitats with different topographic aspects and no slope limitations with slopes 40-60% as preferred slopes. Soil texture was loam, clay loam and silty loam, weak alkaline, and poor in phosphorus and nitrogen. Electrical Conductivity is 1-0.72 ds/m and soil pH of 7.47-7.85. The vegetative growth of this species starts from mid-March. The flowers appear in April and seeds ripen in late on May. The plant propagates only by seeds. Pollen is prolate, elliptic and tricolporate. The destruction of natural habitats of this plant due to overgrazing causes that we find this plant as individual and scattered spots in their natural habitat.
 
Ayuob Mazaraie, Seyed Mohsen Mousavi-Nik, Leila Fahmideh,
Volume 4, Issue 4 (12-2017)
Abstract

Phenolic compounds, especially those with plant origin, constitute an essential part of the human diet due to their antioxidant properties. Antioxidants protect biological systems (nucleic acids, proteins, lipids, lipoproteins) against free radicals and reactive oxygen species. Some medicinal plants contain so high amounts of antioxidants that their use can be considerably effective for human health. The aim of this study was to evaluate the effect of flooding extraction method on phenolic compounds, flavonoids and the level of free radical scavenging properties of medicinal plants including Thyme, Hamadani Yarrow, Shirazi mountain thyme, Yarrow, Chamomile, Saffron corm hyssop Sagebrush, wormwood, Artemisia and Ziziphora clinopodioiedes, in four extraction solvents including water, methanol, acetone and ethanol. The results showed that methanol and water solvents had the highest and the lowest total phenolic, flavonoid and antioxidant activity, respectively. The results also showed that methanol extraction of Shirazi thyme and water extraction of Wormwood plant had the highest and the lowest phenol and flavonoids contents, respectively. The results of trapping the free radicals of DPPH indicated that the methanol extract of Shirazi thyme and aqueous extract of wormwood had the highest and the lowest inhibition activities, respectively. Therefore, the selection of solvent type can affect the rate of the extraction of phenolic compounds, flavonoids and antioxidant activity.
 
Khadijeh Bagheri, Samira Shahbazi, Hamed Askari, Shide Mojerlou, Farangis Amirlou,
Volume 4, Issue 4 (12-2017)
Abstract

Trichoderma species have been famous for production of cellulases with relatively high enzymatic activity. However, attempts to use their cellulolytic enzymes in the bioconversion of cellulosic wastes have not been successful because of high cost of production and low enzymatic yields. This study aimed to obtain gamma-induced mutants of T. viride with enhanced extracellular cellulase production. Spore suspensions were exposed to γ-rays at 250 Gy as optimum dose. After irradiation, all germinated spores were grown onto PDA plates and mutant strains with better sporulation were selected and subcultured five times to test their stability. Cellulase activity was tested using Whatman No. 1 filter paper, carboxymethyl cellulose, avicel, bacterial cellulose and walseth cellulose according to the IUPAC recommendation. Extracellular proteins profiles of mutant strains were studied via SDS-PAGE. The maximum activity of total cellulase and avicelase were observed in the isolate of M21 (92.43 and 74.40 U/mg, respectively) and maximum endo-glucanase activity was observed in M18 mutant. The results of this study showed that the application of gamma ray led to a significant increase in Cellulose activity of 38 percent of mutant strains. Thus, this method could be used as a simple and efficient way to achieve strains with the ability to produce high levels of enzymes and other biological metabolites.
 
Behnam Hamzehee, Maryam Nobakht, Younes Asri, Gholamreza Bakhshi Khaniki,
Volume 4, Issue 4 (12-2017)
Abstract

The genus Crataegus L. has a wide distribution in Iran. Induviduals of Crataegus meyeri Pojark. show morphological variations in different regions. In this research, the effects of climatic variations on morphological traits of C. meyeri were studied. Seventy five specimens collected from nine provinces of Iran were measured in two sets of quantitative and qualitative traits. Statistical analysis of climatic data and morphological traits showed that wind and temperature were the most effective factors affecting the variety of morphological traits including leaf blade of short shoot and flowering shoot, indumentum of fruit surface and fruit shape. Relative humidity has also been correlated with the shape of the fruit base. Quantitative traits of leaf blade of short shoots and flowering shoots showed the highest correlation and leaf blade of elongate shoots with the least statistical correlation with climatic data.
Sedighe Kelij, Zhila Mohammadjani, Alireza Naghinejad,
Volume 4, Issue 4 (12-2017)
Abstract

Wild grapevine, Vitis vinifera subsp. sylvestris is considered as a rare species in Europe and Iran and possesses restricted distribution due to threatening factors. Natural populations of wild grapevine in the north of Iran were evaluated in three wild areas of coastal and plains areas of Miankaleh, submontane areas of Amol and the forest patches of Kojour and a cultivated sample of crop grapevine, V. v. subsp. vinifera in Babolsar. A total of 41 anatomical traits and important ecological factors such as soil and climatic variables were investigated and included in further analyses. Anatomical characteristics of leaf blade and petiole had the most important impact on the separation of wild and the cultivated taxon. All the soil and climatic factors, particularly altitude and annual rainfall were significant between studied stations. Mean temperature of the warmest month along with soil clay and calcareous percentage had the highest effect and relationship with the anatomical traits. Based on the current result, anatomical characters can be used for separation between wild and cultivated populations. They are also effective in separation of different populations of wild grapevine. Quantitative anatomical changes in the studied populations are reflection of the different soil and climatic conditions of their habitat.
 

 
 

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